Publications

Publications from the project here will be referenced by WP.

Publications in a peer-reviewed scientific journals

WP1

- Tayeh N., Klein A., Le Paslier M.-C., Jacquin F., Houtin H., Rond C., Chabert-Martinello M., Magnin-Robert J.-B., Marget P., Aubert G., Burstin J. (2015). Genomic Prediction in Pea: Effect of Marker Density and Training Population Size and Composition on Prediction Accuracy. Front. Plant Sci. 6:941. (November 2015). DOI: http://dx.doi.org/10.3389/fpls.2015.00941

WP2

- Pilet-Nayel M.-L., Moury B., Caffier V., Montarry J., Kerlan M.-C., Fournet S., Durel C.-E., Delourme R. (2017). Quantitative resistance to plant pathogens in pyramiding strategies for durable crop protection. Frontiers in Plant Science, 8, 1838. (October 2017). DOI:10.3389/fpls.2017.01838

- Lavaud C, Baviere M, Le Roy G, Hervé M, Moussart A, Delourme R, Pilet-Nayel M-L (2016). Single and multiple resistance QTL delay symptom appearance and slow down root colonization by Aphanomyces euteiches in pea near isogenic lines. BMC Plant Biol, 16:166. (July 2016) DOI: 10.1186/s12870-016-0822-4

- C. Lavaud, A. Lesné, C. Piriou, G. Leroy, G. Boutet, A. Moussart, C. Poncet, R. Delourme, A. Baranger, M-L. Pilet-Nayel (2015) Validation of QTL for resistance to Aphanomyces euteiches in different pea genetic backgrounds, using Near Isogenic Lines, Theoretical and Applied Genetics 128:2273–2288. (November 2015), doi:10.​1007/​s00122-015-2583-0

WP3

- Desgroux A., Baudais V., Aubert V., Le Roy G., de Larambergue H., Miteul H., Aubert G., Boutet G., Duc G., Baranger A., Burstin J., Manzanares-Dauleux M., Pilet-Nayel M.-L., Bourion V. (2018). Comparative Genome-Wide-Association Mapping identifies common loci controlling root system architecture and resistance to Aphanomyces euteiches in pea. Frontiers in Plant Science, 8 : 2195. (January 2018). DOI:10.3389/fpls.2017.02195

WP4

- McAdam E.L., Meitzel T., Quittenden L.J., Davidson S.E., Dalmais M., Bendahmane A.I., Thompson R., Smith J.J., Nichols D.S., Urquhart S., Gelinas-Marion A., Aubert G., Ross J.J. (2017). Evidence that auxin is required for normal seed size and starch synthesis in pea. New phytologist, 216(1): 193-204. (October 2017). DOI: 10.1111/nph.14690

- Meziadi C., Blanchet S., Geffroy V., Pflieger S. (2017). Virus-induced gene silencing (VIGS) and foreign gene expression in Pisum sativum L. using the ‘one-step’ Bean pod mottle virus (BPMV) viral vector. In Kaufmann M., Klinger C., Savelsbergh A. (eds) Functional Genomics. Methods in Molecular Biology, vol. 1654 (pp.311-319). Humana Press, New York, NY. (September 2017). DOI: 10.1007/978-1-4939-7231-9_23  [Book chapter]

- Meziadi C, Blanchet S, Richard MMS, Pilet-Nayel M-L, Geffroy V et Pflieger S (2016). Bean pod mottle virus: a new powerful tool for functional genomics studies in Pisum sativum. Plant Biotechnology Journal 14: 1777-1787. (August 2016). DOI: 10.1111/pbi.12537

- Meziadi C., Richard M.M.S., Derquennes A., Thareau V., Blanchet S., Gratias A., Pflieger S., Geffroy V. (2016). Development of molecular markers linked to disease resistance genes in common bean based on whole genome sequence. Plant Science 242 (Special Issue): 351-357. (January 2016). DOI: 10.1016/j.plantsci.2015.09.006

- Pflieger S, Blanchet S, Meziadi C, Richard MMS, Thareau V, Mary F, Mazoyer C, Geffroy V. (2014). The “one-step” Bean pod mottle virus (BPMV)-derived vector is a functional genomics tool for efficient overexpression of heterologous protein, virus-induced gene silencing and genetic mapping of BPMV R-gene in common bean (Phaseolus vulgaris L.). BMC Plant Biology 2014, 14:232. (August 2014). DOI :10.1186/s12870-014-0232-4

- Pflieger S, Richard MMS, Blanchet S, Meziadi C, Geffroy V. (2013). VIGS technology: an attractive tool for functional genomics studies in legumes. Functional Plant Biology. 40, 1234-1248. (July 2013). DOI: http://dx.doi.org/10.1071/FP13089

WP6

- Tayeh N., Aluome C., Falque M., Jacquin F., Klein A., Chauveau A., Bérard A., Houtin H., Rond C., Kreplak J., Boucherot K., Martin C., Baranger A., Pilet-Nayel M.-L., Warkentin T. D., Brunel D., Marget P., Le Paslier M.-C., Aubert G., Burstin J. (2015). Development of two major resources for pea genomics: the GenoPea 13.2K SNP Array and a high-density, high-resolution consensus genetic map. The Plant Journal 84: 1257–1273. (December 2015). DOI: 10.1111/tpj.13070

WP8

- Tayeh N., Aubert G., Pilet-Nayel M.-L., Lejeune-Hénaut I., Warkentin T. D., Burstin J. (2015). Genomic tools in pea breeding programs: status and perspectives. Frontiers in Plant Science 6: 1037 (November 2015). DOI :10.3389/fpls.2015.01037

Posters and oral presentations

WP1

- Klein A, Tayeh N, Siol M, Herbommez  JF, Pichon JP, Duarte J, Duborjal H, Houtin H, Blanc N, Valdrini JM,Walczak P, Bleriot O, Hanocq E, Chassin A, Bidon M, Huart M, Touratier M,Martin C, Jacquin F,Aubert G, Burstin J (2014) Towards genome-wide breeding for yield stability in spring pea. Poster. PeaMUST 3d Annual Meeting. 8-9 dec. 2014, Dijon, France.

- Klein A, Tayeh N, Siol M, Herbommez  JF, Pichon JP, Duarte J, Duborjal H, Houtin H, Blanc N, Valdrini JM,Walczak P, Bleriot O, Hanocq E, Chassin A, Bidon M, Huart M, Touratier M,Martin C, Jacquin F,Aubert G, Burstin J (2014) Towards genome-wide breeding for yield stability in spring pea. Poster. Entre Sélection et Génomique..Séminaire Selgen. 17-18 décembre 2014. Paris.

- Nadim TAYEH*, Anthony Klein, Christelle Aluome, Matthieu Falque, Françoise Jacquin, Aurélie Chauveau, Aurélie Bérard, Hervé Houtin, Céline Rond, Marianne Chabert-Martinello, Jonathan Kreplak, Dominique Brunel, Marie-Christine Le Paslier, Grégoire Aubert, Judith Burstin (2016) Development of novel genomic resources in pea (Pisum sativum L.) revolutionizes applications in selection. Invited Talk. PAG XXIV Conference. January 09-13, 2016 - San Diego, CA, USA

- Nadim TAYEH*, Anthony Klein, Christelle Aluome, Matthieu Falque, Françoise Jacquin, Aurélie Chauveau, Aurélie Bérard, Hervé Houtin, Céline Rond, Marianne Chabert-Martinello, Jonathan Kreplak, Dominique Brunel, Marie-Christine Le Paslier, Grégoire Aubert, Judith Burstin (2016) Pea genomics: The revolution is now. Poster. PAG XXIV Conference. January 09-13, 2016 - San Diego, CA, USA

- Klein A, Richer V, Herbommez J-F, Declerck P, Floriot M, Pichon J-P, Duborjal H, Leveugle M, Vieille E, Martin C, Jacquin F, Houtin H, Valdrini J-M, Walczak P, Bleriot O, Hanocq E, Chassin A, Bataillon P, Burstin J (2016). Genomic selection programs for yield stability in pea. 4ème réunion annuelle PeaMUST, 21-23 novembre 2016, Dijon, France. Poster.

WP2

- Lavaud C, Lesné A, Moussart A, Boutet G, Baranger A, Delourme R, Pilet-Nayel M-L (2014) Constructing near-isogenic lines by Marker-Assisted-Selection to validate QTL for resistance to Aphanomyces euteiches in pea. Oralpresentation. ICLGG/IFLRC Conference, 7-11 july 2014, Saskatoon, CANADA.

- Quillévéré-Hamard A, Pilet-Nayel M-L, Onfroy C, Moussart A, Andrivon D, Baranger A, Le May C (2014) Role of legume host species successions on population structure of Aphanomyces euteiches. Poster. ICLGG/IFLRC Conference, 7-11 july 2014, Saskatoon, CANADA.

- Quillévéré-Hamard A, Le May C , Lesné A., Leroy G, Moussart A, Baranger A, Pilet-Nayel M-L (2014) Selection of Aphanomyces euteiches isolates by pea and faba bean in crop successions simulated in controlled conditions. Poster. PeaMUST 3d Annual Meeting. 8-9 dec. 2014, Dijon, France.

- Lesné Angélique, Lavaud C, Leroy G, Piriou C, Glory I, Boutet G, Poncet C, Aubert G, Tayeh N, Pauchon M, Martinant J-P, Comadran J, Bochard A-M, Pilet-Nayel M-L (2014) Creating Near Isogenic Lines for confidence interval reduction of resistance QTL to Aphanomyces euteiches in pea. Poster. PeaMUST 3d Annual Meeting. 8-9 dec. 2014, Dijon, France.

- Magnin-Robert Jean-Bernard, Raffiot B., Buurman M., Declerck P., Floriot M., Batifoy F., Ollivier D., Pilet-Nayel ML,  Desmetz C., Aubert G., Duc G., Marget P. (2014) Development of new plant resources (genetic resources and RIL populations) in Vicia faba L. for genetic studies. Poster. PeaMUST 3d Annual Meeting. 8-9 dec. 2014, Dijon, France.

- Hascoët E, Jaminon O, Devaux C, Blassiau C, Bahrman N, Bochard A-M, Comadran J, Martinant J-P, Pauchon M, Furet G, Declercq P, Floriot M, Bébin T, Lejeune-Hénaut I (2014) Towards Fine-mapping of frost tolerance QTLs in pea. Poster. PeaMUST 3d Annual Meeting. 8-9 dec. 2014, Dijon, France.

- Pilet-Nayel M-L, Moussart A (2015). Aphanomyces root rot of pea: disease management and genetics of resistance. Pulse Crop Root Rot Workshop, 07 November 2015, Niagara Falls, Ontario, Canada. Oral presentation.

- Lejeune-Hénaut I, Pilet-Nayel M-L (2016). Résistances aux principaux stress biotiques et abiotiques chez les légumineuses : génétique comparative et recherche de mécanismes communs. Comité d’Animation Thématique GIS-BV « Interactions abiotiques/biotiques », 27 mai 2016, Paris, France. Oral communication.

- Pilet-Nayel M-L, Aubert G, Marget P, Burstin J, Lejeune-Hénaut I (2016). Identification de locus génétiques d’intérêt pour la sélection de variétés résistantes aux stress multiples chez le pois et la féverole. 1ères Rencontres Francophones sur les Légumineuses, 31 mai-1er juin 2016, Dijon, France. Oral communication.

- Rivière J-P, Lavaud C, Vetel P, Mangin P, Blanc N, Marget P, Declerck P, Furet G, Herbommez J-F, Roullet G, Pilet-Nayel M-L (2016). Evaluation de lignées quasi-isogéniques de pois pour la résistance à Aphanomyces euteiches au champ. 1ères Rencontres Francophones sur les Légumineuses, 31 mai-1er juin 2016, Dijon, France. Poster, Abstract.

- Trigui G., Le Corre L., Honoré D., Boudehri-Giresse K. (2016). How can X-ray Microtomography be used to access seed morphology? Current applications and future prospects. 31^st International Seed Testing Association Congress, 15-21 Juin 2016, Tallinn, Estonie

- Lavaud C, Pilet-Nayel M-L. QTL combination for Marker-Assisted-Selection of Aphanomyces root rot resistance in pea. Symposium PIA GIS-BV, 28-30 septembre 2016, Paris, France. Oral communication.

- Beji S, Fontaine V, Devaux R, Negro S, Bahrman N, Aubert G, Delbreil B, Lejeune-Hénaut I (2016). Genome-wide association mapping of frost tolerance in Pisum sativum. Second International Legume Society Conference, 11-14 octobre 2016, Troia, Portugal. Oral communication, Abstract.

- Pilet-Nayel M-L, Desgroux A, Lavaud C, Lesné A, Boutet G, Aubert G, McGee RJ, Coyne CJ, Bourion V, Burstin J, Baranger A (2016). Genetics of pea resistance to Aphanomyces euteiches in the genomics Era. Second International Legume Society Conference, 11-14 octobre 2016, Troia, Portugal. Oral communication, Abstract.

- Quillévéré-Hamard A, Le Roy G, Moussart A, Pilet-Nayel M-L, Le May C (2016). Genetic and phenotypic diversity of pea isolates of Aphanomyces euteiches in France. Second International Legume Society Conference, 11-14 octobre 2016, Troia, Portugal. Poster, Oral flash, Abstract. 4ème réunion annuelle PeaMUST, 21-23 novembre 2016, Dijon, France

- Lavaud C, Delourme R, Pilet-Nayel M-L (2016). Diversité et combinaison des effets et modes d'action des QTL de résistance à Aphanomyces euteiches chez le pois. Atelier prospectif de recherches sur les légumineuses, Académie d’Agriculture de France, 10 novembre 2016, Paris. Oral communication.

- Beji S, Fontaine V, Devaux R, Batifoy F, Debote B, Negro S, Bahrman N, Aubert G, Delbreil B, Lejeune-Hénaut I (2016). Genome-Wide association mapping of frost tolerance in the Pisum sativum reference collection. 4ème réunion annuelle PeaMUST, 21-23 novembre 2016, Dijon, France. Poster.

- Desmetz C, Kreplak J, Raffiot B, Deulvot C, Ollivier O, Marget P, Terezol M, Bouchez O, Jeziorski C, Pilet-Nayel M-L, Burstin J, Aubert G (2016). From Vicia faba L.cv. Hiverna to a preliminary transcriptome: a study on bruchid resistance in faba bean. 4ème réunion annuelle PeaMUST, 21-23 novembre 2016, Dijon, France. Poster.

- Lavaud C, Lesné A, Riviere J-P, Mangin P, Roullet G, Herbommez J-F, Declerck P, Furet G, Boutet G, Baranger A, Pilet-Nayel M-L (2016). Construction and evaluation of Near-Isogenic Lines for resistance to Aphanomyces euteiches in pea. Second International Legume Society Conference, 11-14 octobre 2016, Troia, Portugal. Poster, Oral flash, Abstract. 4ème réunion annuelle PeaMUST, 21-23 novembre 2016, Dijon, France

- Pilet-Nayel M-L (2017). Apport des marqueurs moléculaires à la sélection de résistances polygéniques. Séminaire scientifique de l'Association des Sélectionneurs Français "Durabilité des résistances aux maladies et amélioration des plantes", 2 février 2017, Versailles, France. Oral communication.

- Terezol M, Kreplak J, Raffiot B, Desmetz C, Deulvot C, Ollivier D, Marget P, Bouchez O, Jeziorski C, Burstin J, Aubert G (2017). Réalisation d’une référence transcriptomique chez la féverole pour l’étude de la tolérance à la bruche. Assemblée Générale du PEPI Ibis, 12-13 juin 2017, Dijon, France. Poster.

- Pilet-Nayel M-L, Lavaud C, Desgroux A, Lesné A, Boutet G, Quillévéré-Hamard A, Le May C, Moussart A, Baranger A (2017). Quantitative resistance for durable management of Aphanomyces root rot of pea. 8th International Conference on Legume Genetics and Genomics, 18-22 septembre 2017, Siófok, Hungary. Invited oral communication, Abstract.

- Kreplak J, Terezol M, Desmetz C, Raffiot B, Bouchez O, Marget P, Burstin J, Aubert G (2017). An RNAseq approach towards deciphering mechanisms involved in bruchid tolerance in faba bean. 8th International Conference on Legume Genetics and Genomics, 18-22 septembre 2017, Siófok, Hungary. Oral communication, Abstract.

- Lesné A, Boutet G, Cartelier K, Desgroux A, Pilet-Nayel M-L, Baranger A (2017). Identification and validation of positional candidate genes for partial resistance to Didymella pinodes and Aphanomyces euteiches in pea. International Conference on "Advances in grain legume cultivation and use", 27-28 Septembre 2017, Novi Sad, Serbia. Oral communication, Abstract.

- Le May C, Onfroy C, Quillévéré-Hamard A, Grunwald N, Vandemark G, Baranger A, Pilet-Nayel M-L, Moussart A (2017). Genetic and phenotypic diversity of pea isolates of Aphanomyces euteiches in France and the US. 7th International Legume Root Diseases workshop, 1er novembre 2017, East-Lansing, MI, USA. Oral communication, Abstract.

- Pilet-Nayel M-L, Coyne CJ, Lesné A, Hamon C, Lavaud C, Desgroux A, Boutet G, Moussart A, McGee RJ, Baranger A (2017). Past, current and future research on genetics of resistance to Aphanomyces root rot of pea. 7th International Legume Root Diseases workshop, 1er novembre 2017, East-Lansing, MI, USA. Oral communication, Abstract.

- Lavaud C, Rivière J-P, Vetel P, Mangin P, Declerck P, Furet G, Herbommez J-F, Roullet G, Pilet-Nayel M-L (2017). Effet de combinaisons de QTL sur la résistance à Aphanomyces euteiches au champ chez le pois. 5^ème Réunion Annuelle PeaMUST, 08-10 novembre 2017, Villeneuve d’Ascq, France. Poster.

- Pilet-Nayel M-L, Lavaud C, Kerlan MC, Paillard S, Moury B, Caffier V, Durel, C-E, Delourme R (2017). Les résistances quantitatives aux maladies et leur utilisation en amélioration des plantes. Le Sélectionneur Français.

WP3

- Desgroux, V. Baudais, J-P. Rivière, P. Mangin, M. Roux-Duparque, A. Moussart, M. Manzanares Dauleux, V. Bourion, M-L. Pilet-Nayel (2014). Identification of pea lines resistant to Aphanomyces euteiches and related root architecture traits. Oralpresentation. ICLGG/IFLRC Conference, 7-11 july 2014, Saskatoon, Canada.

- Bensmihen S., Lefebvre B., Fliegmann J., Bono J.-J., Gough C., Cullimore J. (2015). Lipo-chitooligosaccharide (LCO) responses and perception by LysM-RKs. Oral presentation.  Keystone Conference on Plant receptor kinases: from molecules to environment, Taos, 10th February 2015

- Rameau (2015). Hormonal signals as a link between genes to phenotypes. Conference “Mendel's legacy - 150 years of the genius of genetics” Brno, Czech Republic, Sept 7-10 2015. Invited talk.

- Desgroux A, Baudais V, Aubert V, Le Roy G, de Larambergue H, Miteul H, Aubert G, Boutet G, Duc G, Baranger A, Burstin J, Manzanares-Dauleux M, Pilet-Nayel M-L, Bourion V (2017). Comparative Genome-Wide-Association Mapping identifies common loci controlling root system architecture and resistance to Aphanomyces euteiches in pea. 8th International Conference on Legume Genetics and Genomics, 18-22 Septembre 2017, Siofok, Hungary. Poster.

- Desgroux A, Baranger A, Duc G, Burstin J, Manzanares-Dauleux M, Bourion V, Pilet-Nayel (2017). Comparative genetics of Aphanomyces root rot resistance and root architecture in pea. North American Pulse Improvement Association, 02-03 Novembre 2017, East-Lansing, MI, USA. Invited oral communication.

- Pillot J-P, Boyer F-D, De Saint Germain A, Rameau C (2017). Les avantages expérimentaux du Modèle Pois pour la physiologie. 5ème Réunion Annuelle PeaMUST, 08-10 novembre 2017, Villeneuve d'Ascq, France. Poster.

WP4

- MEZIADI Chouaib, Sophie BLANCHET, Manon RICHARD, Vincent THAREAU, Valérie GEFFROY, Stéphanie PFLIEGER (2015) Bean pod mottle virus: a new viral vector to induce gene silencing in Pisum sativum. Oral presentation. Congrès « Rencontres de Virologie Végétale », 18-22 janvier 2015, Aussois, France.

- Meziadi C, Blanchet S, Richard MMS, Geffroy V et Pflieger S (2016). Bean pod mottle virus: a powerful VIGS vector for functional genomic studies in Pisum sativum. Plant and Animal Genome Conference XXIV, San Diego, USA (9-13 janvier 2016)

- Dalmais M., Marcel F., Plainchamp T., Saffray C., Le Signor C., Thompson R., Pillot J.-P., Rameau C., Bendahmane A. (2017). Functional validation in pea by TILLING : State of Art & Perspectives. 5^ème Réunion Annuelle de PeaMUST, 08-10 novembre 2017, Villeneuve d'Ascq, France. Poster.

WP5

- Lecomte et al. (2015) PEAMUST : Adaptation Multi-Stress et Régulations biologiques pour l’amélioration du rendement et de la stabilité du pois protéagineux. COP21 Side Event "Faire face aux changements climatiques - Les apports de la recherche collaboratives sur projets" 6 juillet 2015 Paris. Poster.

- Larmure A, Bénézit M, Trepos R, Lecomte C, Jeuffroy M-H (2017). Azodyn-Pea, a crop model to adapt pea crop to climate change. 2nd Agriculture and Climate Change Conference, 26-28 Mars 2017, Sitges, Spain. Poster.

WP8

- Alves-Carvalho S., Aluome C., Aubert G., Cruaud C., Klein A., Jacquin F., Carrère S., Brochot A.L., Kreplak J., Martin C., Boucherot K., da Silva C., Gamas P., Wincker P., Brunel D., Lepaslier M.-C., Gouzy J., Burstin J. (2014). Pea in the genomic era. Adam Kondorosi Meeting. Dec. 2014. Gif-sur-Yvette, France. Invited talk. 

- Burstin J., Alves-Carvalho S., Aluome C., Tayeh N., Brochot A.L., Carrère S., Kreplak J., Klein A., Lecomte C., Bourion V., Delaitre C., Falque M., Cruaud C., Salloignon P., Truntzer C., Moreau S., Balzergue S., Lejeune-Hénaut I., Gamas P., J. Gouzy, P. Wincker, M.C. Le Paslier, D. Brunel, G. Aubert, G. Duc (2015) Pea in the genomic era. Seminaire FRAIB 24 février 2015. Toulouse. Invited talk.

- Burstin J., Tayeh N., Klein A., Kreplak J., Jacquin F., Alves-Carvalho S., Aluome C., Carrère S., Gouzy J., Cruaud C., Wincker P., Brunel D., Falque M., Le Paslier M.-C., Aubert G. (2016). Le pois, espèce modèle ? 1ères Rencontres Francophones sur les Légumineuses, 31 mai-1er juin 2016, Dijon.

- Madoui M.-A. , Labadie K., Kreplak J. , Aubert G. , d'Agata L., Capal P., Fournier C., Kougbeadjo A., Vrana J., Gali K.K., Taran B., Belser C., Le Paslier M.-C., McGee R., Edwards D., Batley J., Bendahmane A., Bergès H., Barbe V., Tayeh N., Klein A., Lichtenzveig J., Aury J.-M., Coyne C.J., Warkentin T., Dolezel J., Wincker P., Burstin J. (2016). Towards the genome sequence of pea. Presented at: Second Conference of the International Legume Society. 12-14^th October 2016. Troïa, Portugal.

- Aubert G., Madoui M.-A., Kreplak J., Tayeh N., Labadie K., Klein A., Falque M., Batley J., Pichon J.-P., Cruaud C., Le Paslier M.-C., Leveugle M., Lichtenzveig J., Edwards D., Warkentin T., Coyne C.J., Dolezel J., Wincker P., Burstin J. (2016). Pea Genomics: What Else?. International Annual Meeting of the American Society of Agronomy, the Crop Science Society of America and the Soil Science Society of America. 6-9th November 2016. Phoenix, Arizona.